Meanwhile, in a pony land...

The mares, stallions, colts, fillies, and foals were happily playing among each other, feeling so happy and carefree. The gardens were happily in bloom and everything was all fine and dandy as usual. However, in Celestia's garden, a draconequus statue was in place, it had been the frozen and stoned Discord. A magical blast popped up and there came a couple of what looked like human women, one of them appeared to wear a collar like a dog.

"Claudia, what're we doing here?" the frizzy woman asked as she was scratching herself obsessively.

"Visiting an old friend and to see if she has my wand," The woman next to her said with an evil smile. "Because if she doesn't, then we'll have to see if that idiot has it."

The woman kept scratching herself. "Guh... Couldn't we get me a flea dip or somethin'?"

It seemed like the women weren't seen by the others as they were having another happy and carefree day.

However, a zebra had seen the scene and she didn't like it, she didn't barge to them, but she kept a close eye on them. These humans being in Ponyville cannot be a good thing. And where she knew that she had to inform Twilight Sparkle so then she could send a message to Princess Celestia.

"What can he do?" the itchy woman pointed to the draconequus.

"Chaos, my dear Boots, chaos..." Claudia grinned to the stone statue. "He's going to help us."

The zebra went to her hut, then saw the Mane Six and Spike coming in.

"Zecora, what's the trouble?" Twilight asked as soon as they arrived.

"This isn't a very good thing that I'd been seeing," the zebra told the ponies, unicorns, and pegasi. "For in Ponyville, we are invaded by human beings."

This caused for the Mane Six and Spike to gasp.

"But, how is that possible? Humans don't have magic." Twilight said, remembering her experience of her the Equestria Girls adventure.

"That can't be possible!" Applejack added, appalled.

"I guess it did happen, how else could they have gotten here?" Spike asked in worry.

"I sense that they come from something quite tragic," Zecora recited. "But these humans are possessive of some black magic."

"What're you saying!?" Rarity got alarmed and in a frenzy. "Are we under attack!?"

"I give you this knowledge with heavy word, but it appeared the humans are seeking revenge with the help of Discord." Zecora informed the best she could.

"D-D-Discord...?" Fluttershy shrunk, shivering a little.

"No way, Discord is trapped forever in his stone imprisonment, there is no way that they could possible be able to free him." Rainbow Dash said.

"It seems these humans are not what they seem to be," Zecora replied. "But someone must stop them and end their reign of tyranny."

There was suddenly shaking all around and screams heard. Everypony looked out the window and saw the many once happy citizens of Ponyville, now hiding away. Even if Rainbow Dash helped get the clouds and make weather with the other Pegasus ponies, it appeared that there were dark storm clouds and lightning zaps around.

"HEY!" Rainbow Dash zoomed out the window and went to see her fellow Pegasi.

Fluttershy flew with her.

"Guys, what're you doin'!?" Rainbow Dash set a look to them. "This is supposed to be a lovely, sunny day!"

"We didn't do it, Rainbow Dash, honest!" a black Pegasus with blue mane told her.

"Something's terrible wrong!" the mismatched-eyed Pegasus with golden mane who had muffins for a cutie mark added, she actually looked quite scared.

"What could be causing this weather to happen?" Rainbow Dash asked, seeing this being the first time the weather being in the wrong area on the wrong day.

There came wicked laughter. Claudia was with Boots on a cloud and Discord was there with them.

"Hello, little ponies!" Claudia grinned darkly. "Welcome to your doom!"

"There's a new sheriff in town!" Discord added, spinning his tail wickedly.

Fluttershy let out a frightened scream and flew away to hide away at home. Angel Bunny looked angered with his Pegasus mistress, but he gasped when he saw what was happening and hid with her. Darkness was taking over all over the pony world. Twilight's magic wasn't enough to send them away.

"I'm sorry Twilight, but your results may vary," Zecora warned her. "For you need the help of a fairy."

"A fairy!?" Twilight gasped as her horn wasn't enough to stop the chaos and black magic. "Where do I find a fairy!?"

"Yeah, where can Twilight possibly find a fairy?" Rainbow Dash asked.

"There is a place where not everybody believes in magic in their world," Zecora preformed a spell to show where Murray, Atticus, Patch, Darla, Amber, Annabelle, and Cherry were. "But it also requires the help of a fairy godfather in training with a little girl."

"The human world again?" Twilight blinked, she then heaved a sigh. "Well, okay..."

"Good luck, Twilight!" Pinkie Pie supported. "We'll have a party for when you come back!"

"This time, Twilight Sparkle will not be alone," Zecora told the ponies and dragon once they were all together. "You shall all go together to stop this madness to make this place home sweet home."

"We can all go this time!?" Rarity sounded delighted.

Zecora smiled and nodded, also this time, the human counterparts of the Mane Six wouldn't be there for a change.

"Come on, Fluttershy!" Rainbow Dash yelled out.

"I-I'm not going..." Fluttershy shivered, still frightened of Discord. "Y-You all go on without me... You don't want me there... I'll just mess things up..."

"No you won't, Fluttershy, come on, please." Pinkie Pie begged.

"I-I just can't do it..." Fluttershy said, feeling down in the dumps, then yelped out as a green flame was shot at her.

"YOU MISSED HER! YOU HAD HER RIGHT THERE!" Claudia hissed to the draconequus.

"I-I know... Clumsy me..." Discord chuckled, then looked to see Fluttershy, for some reason, he felt like he couldn't hurt her, he could hurt the others just fine.

Zecora made a portal for them to go through.

"Well hurry up an make up your mind, Fluttershy, we need to get this express train movin'!" Rainbow Dash called as she followed the others.

"Ooh, I love trains!" Pinkie Pie cheered. "Can I pull the whistle to make it go 'choo-choo'?"

"I-I'm coming." Fluttershy said, running over to her friends, not wanting to stay where Claudia, Boots, or Discord were.

The portal almost closed up. Twilight took Fluttershy's hoof and they all jumped in together as the last ones and the portal closed as soon as they were all in, now traveling to a whole new world.